Fix issue where directories are created in the wrong places

src/repo.rs

@@ -122,6 +122,7 @@ impl DirEntry {
         match self {
             DirEntry::File(file) => file.apply(cwd),
             DirEntry::Dir(p, children) => {
+                let cwd = if p != cwd {
                     let cwd = cwd.join(p.file_name().unwrap());
                     if !cwd.exists() {
                         log::info!("Creating {cwd:?}");
@@ -129,6 +130,10 @@ impl DirEntry {
                             .into_diagnostic()
                             .with_context(|| format!("Creating directory {cwd:?}"))?;
                     }
+                    cwd
+                } else {
+                    p.to_owned()
+                };
                 for child in children {
                     child.apply(&cwd)?;
                 }